Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs58203824 chr17:75527071 G/T 0.000134 281 26.18 24.48 12.1 KM Plot
KIRP rs58224889 chr16:78407399 A/G 3.47E-7 284 26.28 20 8.5 KM Plot
KIRP rs58257153 chr16:973196 G/A 5.06E-8 278 27.13 24.13 13.48 KM Plot
KIRP rs58264919 chr6:148665086 T/G 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs584068 chr11:86186146 A/G 0.000108 287 10.7 22.1 26.37 KM Plot
KIRP rs58616630 chr6:27474715 A/G 1.28E-8 289 25.6 29.2 9.77 KM Plot
KIRP rs58656226 chr16:89745091 T/G 1.94E-8 288 26.4 24.15 9.77 KM Plot
KIRP rs58754268 chr10:88207610 T/C 5.63E-8 286 26.38 22.57 9.77 KM Plot
KIRP rs58766116 chr16:90035545 C/G 0.000202 286 24.73 40.43 10.23 KM Plot
KIRP rs5881798 chr6:168979935 A/AT 0.000183 283 25.95 26.7 18.2 KM Plot
KIRP rs590401 chr11:86169135 T/G 4.2E-8 282 26.38 19.33 9.85 KM Plot
KIRP rs59123904 chr22:21374501 G/C 3.77E-5 283 22.57 26.58 40.43 KM Plot
KIRP rs59145894 chr16:90116366 G/A 9.66E-8 288 24.67 38.05 10.7 KM Plot
KIRP rs59148799 chr19:19484008 A/G 5.77E-5 287 24.8 27.1 8.98 KM Plot
KIRP rs59270986 chr4:5538714 A/G 4.69E-5 283 25.7 26.37 12.93 KM Plot